Kind of infrastructure
Platforms/Labs
Typology
Biology / genomics / proteomics
University
Torino (UNITO)
Application / Industrial sector
Agrifood
Circular & Bioeconomy
Energy & environment
Health
Location
Department
Department of Life Sciences and Systems Biology
Features
Equipment list
-Illumina NextSeq 1000 System. It features a novel super-resolution optics system that is optimized to increase cluster brightness, reduce channel cross-talk, and improve the signal-to-noise ratio. It provides flexible output from 30 Gb up to 120 Gb.
-Illumina NextSeq 500 System. At the high output, up to 800 million paired-end reads can be generated (at 150 bp read length) to produce up to 120 Gb of data in 29 hours.
-Illumina MiSeq System. MiSeq reagents enable up to 15 Gb of output with 25 million sequencing reads and 2 × 300 bp read lengths.
-Bioruptor Pico Diagenode for fragmentation.
-TapeStation 4150 Agilent and Qubit 4.0 for quantification and quality control
-Server Cluster TERA-X-CLS-013
-Illumina NextSeq 500 System. At the high output, up to 800 million paired-end reads can be generated (at 150 bp read length) to produce up to 120 Gb of data in 29 hours.
-Illumina MiSeq System. MiSeq reagents enable up to 15 Gb of output with 25 million sequencing reads and 2 × 300 bp read lengths.
-Bioruptor Pico Diagenode for fragmentation.
-TapeStation 4150 Agilent and Qubit 4.0 for quantification and quality control
-Server Cluster TERA-X-CLS-013
Available measurements
APPLICATIONS AND SERVICES
Whole Genome Sequencing (WGS)
Whole Exome Sequencing (WES)
Amplicon Sequencing
Target Gene Sequencing
Whole Transcriptome Sequencing
Poly(A)-RNA Sequencing
Small RNA Sequencing
Ultra-Low Input RNA Sequencing
Single Cell RNA Sequencing
Whole Genome Bisulfite Sequencing (WGBS)
Ultra-Low Input WGBS
Reduced Representation Bisulfite Sequencing (RRBS)
Chromatin Immunoprecipitation Sequencing (ChIP-seq)
Assay for transposase-accessible chromatin sequencing (ATAC-Seq)
Sample processing procedure consists in: sample delivery (purified DNA, purified RNA, cells, tissue), quantification and quality control of starting material (DNA, RNA), library preparation, quality control of libraries, high throughput sequencing on Illumina platform, demultiplexing, quality control of sequencing.
Support on experimental design
Support on sample preparation
Support on data analysis
Data analysis
Whole Genome Sequencing (WGS)
Whole Exome Sequencing (WES)
Amplicon Sequencing
Target Gene Sequencing
Whole Transcriptome Sequencing
Poly(A)-RNA Sequencing
Small RNA Sequencing
Ultra-Low Input RNA Sequencing
Single Cell RNA Sequencing
Whole Genome Bisulfite Sequencing (WGBS)
Ultra-Low Input WGBS
Reduced Representation Bisulfite Sequencing (RRBS)
Chromatin Immunoprecipitation Sequencing (ChIP-seq)
Assay for transposase-accessible chromatin sequencing (ATAC-Seq)
Sample processing procedure consists in: sample delivery (purified DNA, purified RNA, cells, tissue), quantification and quality control of starting material (DNA, RNA), library preparation, quality control of libraries, high throughput sequencing on Illumina platform, demultiplexing, quality control of sequencing.
Support on experimental design
Support on sample preparation
Support on data analysis
Data analysis
Price list
Rates are defined according to specific requests.
Possibility of on-site measurements
It is possible to access the infrastructure by reservation, accompanied by authorized staff, and/or send samples for analysis.
Contact
Person name
Salvatore OLIVIERO
Email
salvatore.oliviero@unito.it